Arbeider, M., Pemberton-Renaud,V., Hodgson, E., & Moore, J.W. (2024). The estuarine growth and residency of juvenile Pacific salmon in North America: a compilation of empirical data. Canadian Journal of Fisheries and Aquatic Sciences. 81(3): 253-267. https://doi.org/10.1139/cjfas-2023-0225

Bailey, C.J., Braun, D.C., McCubbing, D., Reynolds, J.D., Ward, B., Davies, T.D., & Moore, J.W. (2018). The roles of extrinsic and intrinsic factors in the freshwater life-history dynamics of a migratory salmonid. Ecosphere 9(9): e02397. https://doi.org/10.1002/ecs2.2397

Bodtker, K, Peterman, R.M., & Bradford, M.J. (2007). Accounting for Uncertainty in Estimates of Escapement Goals for Fraser River Sockeye Salmon Based on Productivity of Nursery Lakes in British Columbia, Canada. North American Journal of Fisheries Management 27(1):286-302. https://doi.org/10.1577/M06-104.1

Braun, D.C., Cunningham, D.S., Herunter, H.E., Naman, S.M., Martens, A.M. (2025). Long-term trajectories of impacts and recovery of headwater stream temperatures after forest harvest in interior British Columbia. Forest Ecology and Management, 585: 122613. https://doi.org/10.1016/j.foreco.2025.122613

Braun, D.C., Reynolds, J.D., & Patterson, D.A. (2015). Using watershed characteristics to inform cost-effective stream temperature monitoring. Aquatic Ecology, 49:373-388. https://doi.org/10.1007/s10452-015-9531-6

Braun, D.C., Patterson, D.A. & Reynolds, J.D. (2013). Maternal and environmental influences on egg size and juvenile life-history traits in Pacific salmon. Ecology and Evolution, 3(6):1727-1740. https://doi.org/10.1002/ece3.555

Chudnow, R., van Poorten, B.T., Pillipow, R., Spendlow, I., Gantner, N., & Hinch, S. (2023). Spatial distribution and seasonal movement probability estimates of bull trout (Salvelinus confluentus) through a large, uninterrupted river network. Ecology of Freshwater Fish. 32:886-901. https://doi.org/10.1111/eff.12730

Cleary, J.S., Bradford, M.J., & Janz, D.M. (2012). Seasonal and spatial variation in lipid and triacylglycerol levels in juvenile chinook salmon (Oncorhynchus tshawytscha) from the Bridge River, British Columbia. Limnologica, 42(2):144-150. https://doi.org/10.1016/j.limno.2011.10.003.

Cummings, J.W., Hague, M.J., Patterson, D.A., & Peterman, R.M. (2011). The Impact of Different Performance Measures on Model Selection for Fraser River Sockeye Salmon. North American Journal of Fisheries Management, 31(2):323-334. https://doi.org/10.1080/02755947.2011.562750

Cunningham, D.S., Braun, D.C., Herunter, H., & Macdonald, S.J. (2024). Environmental datasets from the Stuart-Takla Fish-Forestry Interaction Project: Baptiste watershed from 1995 to 2009. Canadian Technical Report of Fisheries and Aquatic Sciences. 5385: v + 52p

Cunningham, D., Braun, D.C., Moore, J.W., & Martens, A.M. (2024). Forestry and stream temperatures: a response to comment by R.D. Moore. Canadian Journal of Fisheries and Aquatic Sciences. 81(3):345-347. https://doi.org/10.1139/cjfas-2023-0306

Cunningham, D.S., Braun, D.C., Moore, J.W., & Martens, A.M. (2023). Forestry influences on salmonid habitat in the North Thompson River watershed, British Columbia. Canadian Journal of Fisheries and Aquatic Sciences. 80(7): 1053-1070. https://doi.org/10.1139/cjfas-2022-0255

Gutzmann, S.B., Hodgson, E.E., Braun, D., Moore, J.W. & Hovel, R.A. (2022). Predicting fish weight using photographic image analysis: a case study of broad whitefish in the lower Mackenzie River watershed. Arctic Science. 8:1356-1361. https://doi.org/10.1139/as-2021-0017.

Katinic, P.J., Patterson, D.A., Ydenberg, R.C. (2017). Condition dependence in the marine exit timing of sockeye salmon (Oncorhynchus nerka) returning to Copper Creek, Haida Gwaii. Canadian Journal of Fisheries and Aquatic Sciences, 74(1):15-22. https://doi.org/10.1139/cjfas-2015-0533

Katinic, P.J., Patterson, D.A., Ydenberg, R.C. (2015). Thermal regime, predation danger and the early marine exit of sockeye salmon Oncorhynchus nerka. Journal of Fish Biology, 86, 276 - 287. https://doi.org/10.1111/jfb.12596

Knowler, D.J., MacGregor, B.W., Bradford, M.J., & Peterman, R.M. (2003). Valuing freshwater salmon habitat on the west coast of Canada. Journal of Environmental Management, 69(3):261-273. https://doi.org/10.1016/j.jenvman.2003.09.001

LoScerbo, D., Wilson, S. Robinson, K., Moore, J., & Patterson, D. (2024). Physiological condition infers habitat choice in juvenile sockeye salmon. Conservation Physiology. 12(1): coae011. https://doi.org/10.1093/conphys/coae011

MacGregor, B.W., Peterman, R.M., Pyper, B.J., & Bradford, M.J. (2002). A Decision Analysis Framework for Comparing Experimental Designs of Projects to Enhance Pacific Salmon. North American Journal of Fisheries Management, 22(2):509-527. https://doi.org/10.1577/1548-8675(2002)022<0509:ADAFFC>2.0.CO;2

Maguire, T.J., Weidman, R.P., Mundle, S.O.C., Moore, J.W., Chezik, K.A. & Selbie, D.T. (2020). Impacts of industrial atmospheric emissions on watershed export of dissolved ions in coastal streams: a Bayesian modeling approach. Environmenal Monitoring and Assessment, 194:568. https://doi.org/10.1007/s10661-020-08493-x

Maxwell, M.R., Peterman, R.M., Bradford, M.J., & MacIsaac, E.A. (2006). A Bayesian Analysis of Biological Uncertainty for a Whole-Lake Fertilization Experiment for Sockeye Salmon in Chilko Lake, British Columbia, and Implications for the Benefit-Cost Ratio. North American Journal of Fisheries Management, 26(2):418-430. https://doi.org/10.1577/M05-097.1

Milner, B.L., Braun, D., Moore, J.W., Martens, A.M., LoScerbo, D., Naman, S. (2025). Seasonal dynamics of juvenile coho salmon (Oncorhynchus kisutch) in wetlands of the North Thompson River, British Columbia. Canadian Journal of Fisheries and Aquatic Sciences. 82: 1-19. https://doi.org/10.1139/cjfas-2024-0177

Moore, J.W., Connors, B.M., & Hodgson, E.E. (2021). Conservation risks and portfolio effects in mixed-stock fisheries. Fish and Fisheries. 22:1024-1040. https://doi.org/10.1111/faf.12567.

Moore, J.W., Beakes, M.P., Nesbitt, H.K., Yeakel, J.D., Patterson, D.A., Thompson, L.A., Phillis, C.C., Braun, D.C., Favaro, C., Scott, D., Carr-Harris, C., & Atlas, W.I. (2015). Emergent stability in a large, free-flowing watershed. Ecology, 96(2):340-347. https://doi.org/10.1890/14-0326.1

Naman, S.M., Pitman, K., Cunningham, D.S., Potapova, A., Chartrand, S., Sloat, M., & Moore, J.W. (2024). Forestry impacts on stream flows and temperatures: a quantitative synthesis of paired catchment studies across the Pacific salmon range. Ecological Solutions and Evidence. 5(2): e12328. https://doi.org/10.1002/2688-8319.12328

Nelitz, M.A., MacIsaac, E.A., & Peterman, R.M. (2007). A Science-Based Approach for Identifying Temperature-Sensitive Streams for Rainbow Trout. North American Jounral of Fisheries Management, 27(2):405-424. https://doi.org/10.1577/M05-146.1

Pestes, L.R., Peterman, R.M., Bradford, M.J. & Wood. C.C. (2008). Bayesian Decision Analysis for Evaluating Management Options to Promote Recovery of a Depleted Salmon Population. Conservation Biology, 22(2):351-361. https://doi.org/10.1111/j.1523-1739.2007.00875.x

Porszt, E., Peterman, R.M., Dulvy, N.K., Cooper, A.B., & Irvine, J.R. (2012). Reliability of Indicators of Decline in Abundance. Conservation Biology, 26(5):894-904. https://doi.org/10.1111/j.1523-1739.2012.01882.x

Turner, D. Bradford, M.J., Venditti, J.G., & Peterman, R.M. (2016). Evaluating Uncertainty in Physical Habitat Modelling in a High-Gradient Mountain Stream. River Research and Applications, 32(5):1106-1115. https://doi.org/10.1002/rra.2915

Ulaski, M.E., Warkentin, L., Naman, S.M., & Moore, JW. (2023). Spatially variable effects of streamflow on water temperature and thermal sensitivity within a salmon-bearing watershed in interior British Columbia, Canada. River Research Applications. 39(10):2036-2047. https://doi.org/10.1002/rra.4200

Weidman, P.R., Maguire, T.J., Moore, J.W., Mundle, S.O.C. & Selbie, D. (2021). Elevated levels of sulfur, nitrogen, and fluoride in small coastal streams near an aluminum smelter in north coastal British Columbia: a reply. Environmenal Monitoring and Assessment, 193:212. https://doi.org/10.1007/s10661-021-08973-8

Wilson, S.M., Moore, J.W., Ward, E.J., Kinsel, C.W., Anderson, J.H., Buehrens, T.W., Carr-Harris, C.N., Cochran, P.C., Davies, T.D., Downen, M.R., Godbout, L., Lisi, P.J., Litz, M.N., Patterson, D.A., Selbie, D.T., Sloat, M.R., Suring, E.J., Tattam, I.A., & Wyatt, G.J. (2023). Phenological shifts and mismatch with marine productivity vary among Pacific salmon species and populations. Nature Ecology & Evolution. 7: 852-861. https://doi.org/10.1038/s41559-023-02057-1.

Wilson, S.M., Patterson, D.A., & Moore, J.W. (2022). Intra- and inter-population variation in sensitivity of migratory sockeye salmon smolts to phenological mismatch. Marine Ecology Progress Series 692:119-136. https://doi.org/10.3354/meps14070

Wilson, K.L., Bailey, C.J., Davies, T.D., & Moore, J.W. (2021). Marine and freshwater regime changes impact a community of migratory Pacific salmonids in decline. Global Change Biology, 28:72-85. https://doi.org/10.1111/gcb.15895.

Wilson, S., Robinson, K., Gutzmann, S., Moore, J.W., & Patterson, D. (2021). Limits on performance and survival during long distance migration of juvenile sockeye salmon (Oncorhynchus nerka): a laboratory-based study. Conservation Physiology. 9(1): coab014. https://doi.org/10.1093/conphys/coab014